ConoMass (step 2): identify peptides in mass list

This tool require the following parameters: a result file from the differential PTM mass tool or a session id from this tool.

Working example:

Download a partial electrospray mass file from Conus striatus;

Download results of the ConoMass (step 1) for all peptide from Conus striatus in ConoServer;

Upload the electrospay mass file, choose the monoisotopic mass, and a mass correction of 0;

Upload the ConoMass (step 1) result file;

Choose a precision of 0.1; and press the button "Start analysis".

Upload mass spectrometry file

Accepted format are .csv, .rtf and .txt (file extension is used for detection)

Select the column with the masses to be searched in:
Those masses are :

Monoisotopic masses
Average masses

Mass correction:

List of peptide sequences

Please provide a PTM differential mass file (raw text format):

OR
a PTM differential mass computation ID:

Precision

Error between experimental and computed masses:

Please cite:
Kaas Q, Yu R, Jin AH, Dutertre S and Craik DJ. ConoServer: updated content, knowledge, and discovery tools in the conopeptide database. Nucleic Acids Research (2012) 40(Database issue):D325-30
Kaas Q, Westermann JC, Halai R, Wang CK and Craik DJ. ConoServer, a database for conopeptide sequences and structures. Bioinformatics (2008) 24(3):445-6

ConoServer is managed at the Institute of Molecular Bioscience IMB, Brisbane, Australia.

The database and computational tools found on this website may be used for academic research only, provided that it is referred to ConoServer, the database of conotoxins (http://www.conoserver.org) and the above reference is cited. For any other use please contact David Craik (d.craik@imb.uq.edu.au).

Contacts:
David Craik
Quentin Kaas

Last updated: Friday 1 December 2023